CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TRV_04019
(
Trichophyton verrucosum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
TRV_04019
T31222_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRV_04019
RRM
132
199
VRMRMLPRNTSYEALRSMLLFAKNLLDAEFVPNEYSEDASFLTAIALFETRTAAEEAQAMLNGKPNST
TRV_04019
RRM
429
493
LYVGNLPPDTSEDELKALFSRQRGYKRMIFRQKPNGPICFVEFEDVSFATKCLTELYGYELSNSV
Links
Other
RRM
family RBPs
Other
Trichophyton verrucosum
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ARB_06676
Arthroderma benhamiae
ARB_06676
N
1.000
TERG_07835
Trichophyton rubrum
TERG_07835
N
0.992
TEQG_02351
Trichophyton equinum
TEQG_02351
N
0.985
MCYG_01649
Microsporum canis
MCYG_01649
N
0.970
CPSG_09464
Coccidioides posadasii
CPSG_09464
N
0.756
CIMG_06805
Coccidioides immitis
CIMG_06805
N
0.756