CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
amel4_ncbi_hmm14061
(
Apis mellifera
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
amel4_ncbi_hmm14061
T31854_0.6
DroSpeGe (2008-Jul-18)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
amel4_ncbi_hmm14061
RRM
38
104
VIVEQMVYPISLDVLYQIFTRFGKVLKIVTFTKNNTFQALIQYADMLSAQTAKLSLEGQNIYNSCCT
amel4_ncbi_hmm14061
RRM
235
301
LLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSALIQMAEPHQAHLALTHMDKLRVFGKQIK
amel4_ncbi_hmm14061
RRM
352
417
LHLSNIPTTVTEEEIRDAFTKNGFTVKAFKFFPKDRKMALIQMPSMDDAVAALIKMHNYQLSESNH
Links
Other
RRM
family RBPs
Other
Apis mellifera
RBPs
1 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
heph
Drosophila melanogaster
FBgn0011224
N
0.775