CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
amel4_ncbi_hmm17380
(
Apis mellifera
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
amel4_ncbi_hmm17380
T31866_0.6
DroSpeGe (2008-Jul-18)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
amel4_ncbi_hmm17380
RRM
22
85
IVVSNLQANVTQEDIKELFEDVGELLVSRLVRPGTAEVIYKTLKDATKAVETYHNRQLDGHPMK
Links
Other
RRM
family RBPs
Other
Apis mellifera
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
nasonia_NCBI_hmm118194
Nasonia vitripennis
nasonia_NCBI_hmm118194
N
0.984
AAEL008938
Aedes aegypti
AAEL008938
N
0.797
CPIJ012462
Culex quinquefasciatus
CPIJ012462
N
0.766
CpipJ_CPIJ012462
Culex pipiens
CpipJ_CPIJ012462
N
0.766
AGAP000924
Anopheles gambiae
AGAP000924
N
0.750
PHUM556460
Pediculus humanus
PHUM556460
N
0.734