CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
amel4_ncbi_hmm2537
(
Apis mellifera
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
amel4_ncbi_hmm2537
T31893_0.6
DroSpeGe (2008-Jul-18)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
amel4_ncbi_hmm2537
RRM
16
86
MFVGQVPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVTFYTRKAALDAQNALHNVKTFNGMRH
amel4_ncbi_hmm2537
RRM
103
171
LFVGMLSKKFTENDVRNMFSVYGTIEECSVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQTMEGCS
Links
Other
RRM
family RBPs
Other
Apis mellifera
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
FBgn0262475
Drosophila melanogaster
FBgn0262475
I
0.707
GM26785
Drosophila sechellia
FBgn0181638
N
0.707
GG23780
Drosophila erecta
FBgn0115919
N
0.707