CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AGAP002654
(
Anopheles gambiae
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
AGAP002654
T32480_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AGAP002654-PA
RRM
40
105
INVGNLPKDITEQQLRDHFAGHEVERVEIYHYLRNTLALLVFKEKAAAQKACEEKDGSMLNDRRLR
AGAP002654-PA
RRM
120
179
VIVAVLDDDMTEEKLYDRVKEHCEVTQVFIFHPLGYVHLGKDVDKAAVLEKLNAGGLKAY
AGAP002654-PA
RRM
215
277
WVENTEELKKACSEAGTITEAIANNVSQGSSNYYARIFFETEEQAAKAAELLNGKVFEGKRIH
AGAP002654-PA
RRM
293
348
VYVAPLERTVTEEEVYEHFKQFGDIDFVNRRNCGENAIVCYKTSEAAEKALACTTF
AGAP002654-PA
RRM
424
500
VYVSNIPFSCPAHVIREFFSGAGGEVKFIFSPQHYHPYRLSSPQPVKTAMVYYTRRSDMLNAIKQLDKKMLNNQHLH
AGAP002654-PA
RRM
516
575
VKLSKITESLSEDAIFRKMRPLGKVVRLTKKNRSLAFVEFADAADVEKVLKMKPDELTIN
AGAP002654-PB
RRM
40
105
INVGNLPKDITEQQLRDHFAGHEVERVEIYHYLRNTLALLVFKEKAAAQKACEEKDGSMLNDRRLR
AGAP002654-PB
RRM
120
179
VIVAVLDDDMTEEKLYDRVKEHCEVTQVFIFHPLGYVHLGKDVDKAAVLEKLNAGGLKAY
AGAP002654-PB
RRM
215
277
WVENTEELKKACSEAGTITEAIANNVSQGSSNYYARIFFETEEQAAKAAELLNGKVFEGKRIH
AGAP002654-PB
RRM
293
348
VYVAPLERTVTEEEVYEHFKQFGDIDFVNRRNCGENAIVCYKTSEAAEKALACTTF
AGAP002654-PB
RRM
424
500
VYVSNIPFSCPAHVIREFFSGAGGEVKFIFSPQHYHPYRLSSPQPVKTAMVYYTRRSDMLNAIKQLDKKMLNNQHLH
AGAP002654-PB
RRM
516
575
VKLSKITESLSEDAIFRKMRPLGKVVRLTKKNRSLAFVEFADAADVEKVLKMKPDELTIN
Links
Other
RRM
family RBPs
Other
Anopheles gambiae
RBPs
1 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action