CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ATEG_09693
(
Aspergillus terreus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CADATEAG00004149
T33743_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADATEAP00004149
RRM
4
58
TDFSRCGEIKRLVMGLDRFTKTPCGFCFVEYYTHQDALDCLKYIGGTKLDERIIR
Links
Other
RRM
family RBPs
Other
Aspergillus terreus
RBPs
12 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ACLA_080400
Aspergillus clavatus
CADACLAG00007885
N
0.769
CHGG_03355
Chaetomium globosum
CHGG_03355
N
0.746
FOXG_09405
Fusarium oxysporum
FOXG_09405
N
0.746
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014
Nectria haematococca
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014
N
0.718
AFUA_2G08570
Aspergillus fumigatus
CADAFUAG00004718
N
0.704
AFLA_046450
Aspergillus flavus
CADAFLAG00005972
N
0.704
Pc13g04070
Penicillium chrysogenum
Pc13g04070
N
0.704
estExt_Genewise1Plus.C_150343
Trichoderma atroviride
estExt_Genewise1Plus.C_150343
N
0.704
estExt_Genewise1Plus.C_40730
Myceliophthora thermophila
estExt_Genewise1Plus.C_40730
N
0.704
Pa_7_2520
Podospora anserina
Pa_7_2520
N
0.704
NFIA_084190
Neosartorya fischeri
CADNFIAG00008064
N
0.704
PMAA_070830
Penicillium marneffei
PMAA_070830
N
0.704