HNRNPCL1 (Choloepus hoffmanni)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCHOG00000010033 T35317_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPC
M025_0.6 		Homo sapiens HUUUUUK RNAcompete
Ray et al.(2013)
RNCMPT00025 		0.953
HNRNPCL1
M158_0.6 		Homo sapiens HUUUUUK RNAcompete
Ray et al.(2013)
RNCMPT00167 		0.859
RALY
M150_0.6 		Homo sapiens UUUUUUB RNAcompete
Ray et al.(2013)
RNCMPT00159 		0.750
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCHOP00000008886 RRM 18 80

Links

Other RRM family RBPs
Other Choloepus hoffmanni RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCPOG00000021722 Cavia porcellus ENSCPOG00000021722 I 0.844
ENSPTRG00000029636 Pan troglodytes ENSPTRG00000029636 I 0.797
ENSGGOG00000028510 Gorilla gorilla ENSGGOG00000028510 I 0.781
ENSMMUG00000016162 Macaca mulatta ENSMMUG00000016162 I 0.766
D4A7A3_RAT Rattus norvegicus ENSRNOG00000043202 I 0.750
ENSGGOG00000007647 Gorilla gorilla ENSGGOG00000007647 I 0.750
ENSPPYG00000017536 Pongo pygmaeus ENSPPYG00000017536 I 0.719
D3ZXZ0_RAT Rattus norvegicus ENSRNOG00000028224 I 0.719