ENSCING00000003864 (Ciona intestinalis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCING00000003864 T35383_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCINP00000007967 RRM 43 112
ENSCINP00000007967 RRM 123 189
ENSCINP00000007967 RRM 218 283
ENSCINP00000007973 RRM 43 112
ENSCINP00000007973 RRM 123 189
ENSCINP00000007973 RRM 218 283
ENSCINP00000007976 RRM 43 112
ENSCINP00000007976 RRM 123 189
ENSCINP00000007976 RRM 218 283

Links

Other RRM family RBPs
Other Ciona intestinalis RBPs

9 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCSAVG00000009923 Ciona savignyi ENSCSAVG00000009923 N 0.956
A1CF Tetraodon nigroviridis ENSTNIG00000003580 I 0.707
A1CF Monodelphis domestica ENSMODG00000016478 I 0.706
A1CF Taeniopygia guttata ENSTGUG00000005090 I 0.702
A1CF Loxodonta africana ENSLAFG00000015462 I 0.702
a1cf Danio rerio ENSDARG00000002968 I 0.702
A1CF Tarsius syrichta ENSTSYG00000001755 I 0.702
A1CF Macropus eugenii ENSMEUG00000015909 I 0.701