CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PTBP2
(
Callithrix jacchus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSCJAG00000018172
T35656_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000033602
RRM
25
81
LHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAV
ENSCJAP00000033602
RRM
158
197
HQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLI
Links
Other
RRM
family RBPs
Other
Callithrix jacchus
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
A8R3Y9_BOVIN
Bos taurus
ENSBTAG00000008809
N
0.841
PTBP2
Tupaia belangeri
ENSTBEG00000010797
N
0.766
PTBP2
Pan troglodytes
ENSPTRG00000000987
I
0.766
PTBP2
Procavia capensis
ENSPCAG00000010292
N
0.766
PTBP2
Homo sapiens
ENSG00000117569
I
0.766
PTBP2
Macaca mulatta
ENSMMUG00000016130
I
0.766
PTBP2
Monodelphis domestica
ENSMODG00000004211
I
0.758