CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
cpeb4
(
Danio rerio
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSDARG00000056691
T36178_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000073682
RRM
380
446
VFVGGLPPDIDEDEITASFRRFGHLFVDWPHKAESKSYFPPKGYAFLLFQDESSVQALIDACMEEDG
Links
Other
RRM
family RBPs
Other
Danio rerio
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CPEB2
Spermophilus tridecemlineatus
ENSSTOG00000002388
N
0.925
CPEB3
Dasypus novemcinctus
ENSDNOG00000013705
N
0.925
Cpeb3
Mus musculus
ENSMUSG00000039652
I
0.925
CPEB2
Echinops telfairi
ENSETEG00000018238
N
0.910
Smp_136410
Schistosoma mansoni
Smp_136410
N
0.761