CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Alkbh8
(
Dipodomys ordii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSDORG00000008596
T36482_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDORP00000008068
RRM
50
106
GGLGNGVSRKQLLPVLQGCGSVDSLLMPPNKPYSFVTYATTEEARKAYAVLHGKEIV
Links
Other
RRM
family RBPs
Other
Dipodomys ordii
RBPs
18 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ALKBH8
Oryctolagus cuniculus
ENSOCUG00000011931
N
0.780
ALKBH8
Vicugna pacos
ENSVPAG00000004932
N
0.763
ENSSTOG00000007139
Spermophilus tridecemlineatus
ENSSTOG00000007139
N
0.763
ALKBH8
Felis catus
ENSFCAG00000003526
N
0.746
LOC100061658
Equus caballus
ENSECAG00000019425
N
0.733
ALKBH8
Tarsius syrichta
ENSTSYG00000007339
N
0.729
ALKBH8
Tupaia belangeri
ENSTBEG00000002728
N
0.729
ALKBH8
Cavia porcellus
ENSCPOG00000006875
N
0.729
ALKBH8
Canis familiaris
ENSCAFG00000014696
N
0.729
ALKBH8
Loxodonta africana
ENSLAFG00000017895
N
0.721
ALKBH8
Homo sapiens
ENSG00000137760
N
0.712
Ame_R017945
Ailuropoda melanoleuca
Ame_R017945
N
0.712
ALKBH8
Tursiops truncatus
ENSTTRG00000000238
N
0.712
ALKBH8
Gorilla gorilla
ENSGGOG00000015505
N
0.712
ALKBH8
Macaca mulatta
ENSMMUG00000005437
N
0.712
ALKBH8
Pan troglodytes
ENSPTRG00000004240
N
0.712
ENSMEUG00000015254
Macropus eugenii
ENSMEUG00000015254
N
0.712
ALKBH8
Ochotona princeps
ENSOPRG00000009592
N
0.700