CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
LOC100060252
(
Equus caballus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSECAG00000014940
T36636_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSECAP00000012585
RRM
234
299
LYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLN
Links
Other
RRM
family RBPs
Other
Equus caballus
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM22
Tarsius syrichta
ENSTSYG00000003939
N
1.000
Ame_R006129
Ailuropoda melanoleuca
Ame_R006129
N
1.000
RBM22
Sorex araneus
ENSSARG00000003205
N
1.000
ENSMLUG00000009040
Myotis lucifugus
ENSMLUG00000009040
N
1.000
ENSEEUG00000009778
Erinaceus europaeus
ENSEEUG00000009778
N
1.000
ENSMEUG00000001573
Macropus eugenii
ENSMEUG00000001573
N
0.970