CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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NCBP2
(
Echinops telfairi
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSETEG00000006407
T36911_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSETEP00000005201
RRM
16
62
LYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKVKKTACGFCFVXX
Links
Other
RRM
family RBPs
Other
Echinops telfairi
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSOPRG00000006943
Ochotona princeps
ENSOPRG00000006943
N
1.000
NCBP2
Ornithorhynchus anatinus
ENSOANG00000011325
N
0.917
GRMZM2G034804
Zea mays
GRMZM2G034804
N
0.766