CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RAVER1
(
Echinops telfairi
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSETEG00000008201
T36925_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSETEP00000006664
RRM
25
71
LLSDYELKYCFVDKYKGTAFVTLLNGAQAEAAISAFHQTRLRERELS
ENSETEP00000006664
RRM
81
151
LCVANLPPSLTQQQFEELVRPFGSLERCFLVYSERSGHSKGYGFAEYMKKDSAARAKSDLLGKPLGPRTLY
Links
Other
RRM
family RBPs
Other
Echinops telfairi
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Raver1
Rattus norvegicus
ENSRNOG00000020710
N
0.830
RAVER1
Procavia capensis
ENSPCAG00000002699
N
0.830
Raver1
Mus musculus
ENSMUSG00000010205
N
0.830