CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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DAZAP1
(
Echinops telfairi
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSETEG00000008636
T36931_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
DAZAP1
M013_0.6
Homo sapiens
UAGKWWR
RNAcompete
Ray et al.(2013)
RNCMPT00013
0.993
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSETEP00000007018
RRM
12
81
LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNID
ENSETEP00000007018
RRM
115
184
IFVGGIPHNCGETELREYFKKFGVVTEMVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE
Links
Other
RRM
family RBPs
Other
Echinops telfairi
RBPs
35 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
DAZAP1
Homo sapiens
ENSG00000071626
D
0.993
DAZAP1
Taeniopygia guttata
ENSTGUG00000000869
I
0.993
Dazap1
Rattus norvegicus
ENSRNOG00000031387
I
0.993
DAZAP1
Pteropus vampyrus
ENSPVAG00000003169
I
0.993
DAZAP1
Pan troglodytes
ENSPTRG00000010199
I
0.993
DAZAP1
Tursiops truncatus
ENSTTRG00000014336
I
0.993
DAZAP1
Bos taurus
ENSBTAG00000019714
I
0.993
LOC100068825
Equus caballus
ENSECAG00000011805
I
0.993
DAZAP1
Cavia porcellus
ENSCPOG00000020185
I
0.993
LOC100395069
Callithrix jacchus
ENSCJAG00000005609
I
0.993
DAZAP1
Canis familiaris
ENSCAFG00000019528
I
0.993
ENSPPYG00000009316
Pongo pygmaeus
ENSPPYG00000009316
I
0.993
DAZAP1
Spermophilus tridecemlineatus
ENSSTOG00000006401
I
0.993
DAZAP1
Macaca mulatta
ENSMMUG00000003047
I
0.993
DAZAP1
Loxodonta africana
ENSLAFG00000018103
I
0.993
DAZAP1
Monodelphis domestica
ENSMODG00000005157
I
0.993
Dazap1
Mus musculus
ENSMUSG00000069565
I
0.993
Q5ZM92_CHICK
Gallus gallus
ENSGALG00000015200
I
0.993
DAZAP1
Gorilla gorilla
ENSGGOG00000002814
I
0.993
DAZAP1
Myotis lucifugus
ENSMLUG00000014975
I
0.993
dazap1
Xenopus tropicalis
ENSXETG00000003704
I
0.986
ENSMGAG00000004149
Meleagris gallopavo
ENSMGAG00000004149
I
0.979
CBU92530
Xenopus laevis
CBU92530
I
0.971
Q98SJ2
Xenopus laevis
Q98SJ2
I
0.971
AAK26172
Xenopus laevis
AAK26172
I
0.971
CBF67656
Xenopus laevis
CBF67656
I
0.971
AAH77252
Xenopus laevis
AAH77252
I
0.971
DAZAP1
Ornithorhynchus anatinus
ENSOANG00000014632
I
0.964
DAZAP1
Tetraodon nigroviridis
ENSTNIG00000010201
I
0.914
DAZAP1
Oryzias latipes
ENSORLG00000008278
I
0.914
DAZAP1
Gasterosteus aculeatus
ENSGACG00000008259
I
0.914
dazap1
Danio rerio
ENSDARG00000070846
I
0.907
DAZAP1
Takifugu rubripes
ENSTRUG00000002467
I
0.907
Ame_R011913
Ailuropoda melanoleuca
Ame_R011913
I
0.900
DAZAP1
Otolemur garnettii
ENSOGAG00000000232
I
0.793