CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSMODG00000018051
(
Monodelphis domestica
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMODG00000018051
T39193_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000022505
RRM
41
89
RHVLSIRVCKEMITRHSLGYAYVNFQQRADAEPALDTMNFDVIKGKPIH
ENSMODP00000022505
RRM
115
180
VFVKNLDKAIDNKVLYDTFSAFGNILSCKVVCDENGSKSYAFVHFETQYTADRAIEGMLLNDRKVF
ENSMODP00000022505
RRM
204
270
VYIKNFGDDIDEERLKEIFSKYGKTECQSDDASGKSKIFGLVSFEKHEDANKADEEMNGKDINGKMV
ENSMODP00000022505
RRM
290
357
EVKNLDDTIDDKKLRKEYSPFGSNTTTKVMLEDGRSRDFGFVCFSSPDEVTKAVTEMNEPIVGSKPLF
Links
Other
RRM
family RBPs
Other
Monodelphis domestica
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSACAG00000002544
Anolis carolinensis
ENSACAG00000002544
I
0.733
XM_001365232.1
Monodelphis domestica
ENSMODG00000017657
I
0.717
PABPC4
Gallus gallus
ENSGALG00000003800
I
0.716
ENSOANG00000010001
Ornithorhynchus anatinus
ENSOANG00000010001
I
0.709
PABPC4
Taeniopygia guttata
ENSTGUG00000001266
I
0.703