CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSOCUG00000027449
(
Oryctolagus cuniculus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOCUG00000027449
T39790_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000015633
RRM
91
158
VHIWRLTRNVTKDHIMEIFSTYGKSKMIDMPVDRMHHLSKGYACVGFEEAKKALKHMDGAQNDGQEIT
Links
Other
RRM
family RBPs
Other
Oryctolagus cuniculus
RBPs
41 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSOCUG00000021516
Oryctolagus cuniculus
ENSOCUG00000021516
N
1.000
RNPS1
Oryctolagus cuniculus
ENSOCUG00000004387
N
0.797
RNPS1
Erinaceus europaeus
ENSEEUG00000005933
N
0.784
RNPS1
Felis catus
ENSFCAG00000007690
N
0.784
RNPS1
Loxodonta africana
ENSLAFG00000000728
N
0.784
Rnps1
Dipodomys ordii
ENSDORG00000001755
N
0.784
RNPS1
Homo sapiens
ENSG00000205937
N
0.784
RNPS1_BOVIN
Bos taurus
ENSBTAG00000009969
N
0.784
LOC100403592
Callithrix jacchus
ENSCJAG00000014969
N
0.784
RNPS1
Choloepus hoffmanni
ENSCHOG00000004866
N
0.784
RNPS1
Canis familiaris
ENSCAFG00000019397
N
0.784
RNPS1
Tursiops truncatus
ENSTTRG00000008220
N
0.784
RNPS1
Ochotona princeps
ENSOPRG00000016422
N
0.784
RNPS1
Macropus eugenii
ENSMEUG00000008882
N
0.784
Rnps1
Mus musculus
ENSMUSG00000034681
N
0.784
Rnps1
Rattus norvegicus
ENSRNOG00000008703
N
0.784
RNPS1
Pteropus vampyrus
ENSPVAG00000005105
N
0.784
RNPS1
Pan troglodytes
ENSPTRG00000031310
N
0.784
LOC695816
Macaca mulatta
ENSMMUG00000019238
N
0.784
RNPS1
Sorex araneus
ENSSARG00000001577
N
0.784
RNPS1
Cavia porcellus
ENSCPOG00000002066
N
0.784
RNPS1
Tupaia belangeri
ENSTBEG00000009098
N
0.784
RNPS1
Spermophilus tridecemlineatus
ENSSTOG00000013200
N
0.784
RNPS1
Sus scrofa
ENSSSCG00000008048
N
0.784
RNPS1
Tarsius syrichta
ENSTSYG00000001629
N
0.784
Q5XG24
Xenopus laevis
Q5XG24
N
0.770
Q3KPW1
Xenopus laevis
Q3KPW1
N
0.770
RNPS1
Procavia capensis
ENSPCAG00000004514
N
0.770
rnps1
Xenopus tropicalis
ENSXETG00000024439
N
0.770
RNPS1
Vicugna pacos
ENSVPAG00000009976
N
0.770
AAH84646
Xenopus laevis
AAH84646
N
0.770
AAI06520
Xenopus laevis
AAI06520
N
0.770
RNPS1
Monodelphis domestica
ENSMODG00000015891
N
0.757
ENSRNOG00000021566
Rattus norvegicus
ENSRNOG00000021566
N
0.743
RNPS1
Meleagris gallopavo
ENSMGAG00000010042
N
0.743
RNPS1
Gallus gallus
ENSGALG00000009288
N
0.743
RNPS1
Taeniopygia guttata
ENSTGUG00000003237
N
0.743
LOC688526
Rattus norvegicus
ENSRNOG00000027239
N
0.716
RNPS1
Oryzias latipes
ENSORLG00000018532
N
0.703
ENSGGOG00000014275
Gorilla gorilla
ENSGGOG00000014275
N
0.703
RNPS1
Gasterosteus aculeatus
ENSGACG00000011261
N
0.703