CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ELAVL3
(
Ochotona princeps
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOPRG00000007373
T39979_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000006749
RRM
38
108
LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPSDADKAINTLNGLKLQTKTIK
ENSOPRP00000006749
RRM
124
192
LYVSGLPKAMSQKDMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAA
Links
Other
RRM
family RBPs
Other
Ochotona princeps
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ELAVL3
Macaca mulatta
ENSMMUG00000020616
N
0.979
LOC100391077
Callithrix jacchus
ENSCJAG00000005589
N
0.979
ELAVL4
Felis catus
ENSFCAG00000010438
N
0.907
ELAVL2
Felis catus
ENSFCAG00000011976
N
0.900
ELAVL2
Homo sapiens
ENSG00000107105
D
0.871