CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM34
(
Ochotona princeps
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOPRG00000013930
T40037_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000012707
RRM
189
202
VFVGNLPVTCNKKX
ENSOPRP00000012707
RRM
237
276
RKVHPDQKNINAYVVFKDQGAATKALARNGTHIADGFRIR
ENSOPRP00000012707
RRM
291
360
VFVGNLPYKVEESAVEEHFLDCGSIVAVRIVRDQVTGIGKGFGYVLFENKDSVLLALKLNNSELMGRKLR
Links
Other
RRM
family RBPs
Other
Ochotona princeps
RBPs
1 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM34
Homo sapiens
ENSG00000188739
N
0.824