CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM28
(
Procavia capensis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSPCAG00000008223
T40354_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPCAP00000007722
RRM
6
74
LFVSRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMPEDVQRALKEITTFEGCKIS
ENSPCAP00000007722
RRM
116
152
LIIRNLSFKCSEDDLKTVFAQFGAVEVNVPRKPXXXX
ENSPCAP00000007722
RRM
372
403
XXXXXXCAFAQFLTQEAAQKCLAVASPETEGG
ENSPCAP00000007722
RRM
489
566
LCLHNLPKAVDDQQLRKLLLSATRGQKGVRIKECRVMRDLKTAHGRVRGQSLGYAFAEFQAHEHALMALRHINNNPDI
Links
Other
RRM
family RBPs
Other
Procavia capensis
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM28
Tupaia belangeri
ENSTBEG00000012749
N
0.859
RBM28
Erinaceus europaeus
ENSEEUG00000002389
I
0.748