CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSSSCG00000015620
(
Sus scrofa
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSSSCG00000015620
T41524_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000016560
RRM
32
103
VFVGDLSPEITAEDIKSAFTSFGKAMDARVVKDMATGKSKGYGSVSFFYNKLDAENAIVRMGGQWLGGRQIK
ENSSSCP00000016560
RRM
141
205
VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKRYSFVRFSTHGSAAHAIVSVTGTTIEGRVVK
Links
Other
RRM
family RBPs
Other
Sus scrofa
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TIAL1
Callithrix jacchus
ENSCJAG00000019682
I
0.759
TIAL1
Monodelphis domestica
ENSMODG00000008865
I
0.759
TIAL1
Homo sapiens
ENSG00000151923
D
0.701
TIAL1
Macaca mulatta
ENSMMUG00000001472
I
0.701