CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM33
(
Tetraodon nigroviridis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTNIG00000012779
T42107_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000015752
RRM
531
595
VSIEGLSSSTTDMQLRNLLRSIGPIEMFSMFPQQRKAVAKFTNPEHAANFQMSFHRHMIDLSHID
Links
Other
RRM
family RBPs
Other
Tetraodon nigroviridis
RBPs
13 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM33
Takifugu rubripes
ENSTRUG00000017878
N
0.954
RBM33
Gasterosteus aculeatus
ENSGACG00000003891
N
0.846
RBM33
Oryzias latipes
ENSORLG00000010456
N
0.815
ENSDARG00000074784
Danio rerio
ENSDARG00000074784
N
0.738
ENSMODG00000005006
Monodelphis domestica
ENSMODG00000005006
N
0.708
RBM33
Taeniopygia guttata
ENSTGUG00000000696
N
0.708
RBM33
Procavia capensis
ENSPCAG00000006296
N
0.708
RBM33
Macropus eugenii
ENSMEUG00000010548
N
0.708
RBM33
Loxodonta africana
ENSLAFG00000015795
N
0.708
RBM33
Choloepus hoffmanni
ENSCHOG00000004031
N
0.708
RBM33
Felis catus
ENSFCAG00000006602
N
0.708
Ame_R017769
Ailuropoda melanoleuca
Ame_R017769
N
0.708
ENSCAFG00000005100
Canis familiaris
ENSCAFG00000005100
N
0.708