CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
PPIE
(
Tarsius syrichta
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTSYG00000000401
T42393_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTSYP00000000367
RRM
8
47
LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETXXXX
Links
Other
RRM
family RBPs
Other
Tarsius syrichta
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PPIE
Homo sapiens
ENSG00000084072
N
0.900
PPIE
Pan troglodytes
ENSPTRG00000000577
N
0.900
PPIE
Macaca mulatta
ENSMMUG00000018869
N
0.878