CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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HNRNPA3
(
Tarsius syrichta
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTSYG00000012949
T42508_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTSYP00000011888
RRM
69
106
XXXXXXSRGFGFVTYSCVEEGDAAMCARPHKVDGRVVE
ENSTSYP00000011888
RRM
128
197
IFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE
Links
Other
RRM
family RBPs
Other
Tarsius syrichta
RBPs
8 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HNRNPA3
Monodelphis domestica
ENSMODG00000019803
I
0.884
ENSGACG00000009435
Gasterosteus aculeatus
ENSGACG00000009435
I
0.748
ENSRNOG00000029898
Rattus norvegicus
ENSRNOG00000029898
N
0.734
ENSCPOG00000004251
Cavia porcellus
ENSCPOG00000004251
I
0.704
LOC100066794
Equus caballus
ENSECAG00000023237
I
0.702
HNRNPA3
Felis catus
ENSFCAG00000012146
I
0.702
HNRNPA3
Anolis carolinensis
ENSACAG00000012234
I
0.702
ENSCAFG00000002024
Canis familiaris
ENSCAFG00000002024
N
0.701