trmt2a (Xenopus tropicalis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSXETG00000006323 T42843_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSXETP00000013858 RRM 53 118
ENSXETP00000013859 RRM 18 83
ENSXETP00000013860 RRM 74 139

Links

Other RRM family RBPs
Other Xenopus tropicalis RBPs

7 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAI42551 Xenopus laevis AAI42551 N 0.939
TRMT2A Anolis carolinensis ENSACAG00000007994 N 0.803
TRMT2A Gallus gallus ENSGALG00000002094 N 0.773
TRMT2A Tetraodon nigroviridis ENSTNIG00000016761 N 0.742
TRMT2A Gasterosteus aculeatus ENSGACG00000012965 N 0.742
TRMT2A Takifugu rubripes ENSTRUG00000013546 N 0.727