rin (Drosophila melanogaster)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0015778 T43014_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
rin
M129_0.6		 Drosophila melanogaster RRWUGAW RNAcompete
Ray et al.(2013)
RNCMPT00138 		(Direct)

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M129_0.6 RRM 51 125

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0082264 RRM 495 569
FBpp0082265 RRM 495 569
FBpp0082266 RRM 495 569
FBpp0082267 RRM 495 569
FBpp0082268 RRM 495 569

Links

Other RRM family RBPs
Other Drosophila melanogaster RBPs

9 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GM24117 Drosophila sechellia FBgn0178981 I 1.000
GE26283 Drosophila yakuba FBgn0243314 I 1.000
GG19770 Drosophila erecta FBgn0111971 I 1.000
GD18916 Drosophila simulans FBgn0190427 I 1.000
GA27297-RA Drosophila pseudoobscura FBgn0248665 I 0.933
GL23542 Drosophila persimilis FBgn0161132 I 0.920
GF17607 Drosophila ananassae FBgn0094625 I 0.893
GI22064 Drosophila mojavensis FBgn0144793 I 0.827