CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
Eap
(
Drosophila melanogaster
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0035063
T43060_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0072281
RRM
116
181
LYVTNLNFETTKDDLELHFSAAGTVKSIRIPKKRRGGFAFVEMADLSSFQNAFQLHNTELQGRNIK
Links
Other
RRM
family RBPs
Other
Drosophila melanogaster
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GE14442
Drosophila yakuba
FBgn0232048
N
0.985
GG23005
Drosophila erecta
FBgn0115162
N
0.985
GD11896
Drosophila simulans
FBgn0183635
N
0.985
GM11898
Drosophila sechellia
FBgn0166839
N
0.985
GJ21274
Drosophila virilis
FBgn0208406
N
0.879
GI20026
Drosophila mojavensis
FBgn0142762
N
0.833
GK21670
Drosophila willistoni
FBgn0223655
N
0.704