CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GG19920
(
Drosophila erecta
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0112120
T43397_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0138466
RRM
115
184
IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVNGMLCNNQKVH
FBpp0138466
RRM
205
274
LYVKNLSEEFTEQHLREMFEPYGRITSHKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFL
Links
Other
RRM
family RBPs
Other
Drosophila erecta
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GE11444
Drosophila yakuba
FBgn0229249
N
1.000
CG4612
Drosophila melanogaster
FBgn0035016
N
1.000
GM11822
Drosophila sechellia
FBgn0166764
N
1.000
GD24944
Drosophila simulans
FBgn0196258
N
1.000
GL20391
Drosophila persimilis
FBgn0157986
N
0.993
GA18301-RA
Drosophila pseudoobscura
FBgn0078306
N
0.993
GI19109
Drosophila mojavensis
FBgn0141848
N
0.979
GK19472
Drosophila willistoni
FBgn0221470
N
0.979
GH22019
Drosophila grimshawi
FBgn0129480
N
0.979
GF11244
Drosophila ananassae
FBgn0088284
N
0.979
GJ22239
Drosophila virilis
FBgn0209352
N
0.971