CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
GD18918
(
Drosophila simulans
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0190429
T43967_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0217320
RRM
1
48
MRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRIH
Links
Other
RRM
family RBPs
Other
Drosophila simulans
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GM24119
Drosophila sechellia
FBgn0178983
N
1.000
GG19774
Drosophila erecta
FBgn0111975
N
1.000
GE26286
Drosophila yakuba
FBgn0243317
N
1.000
AGAP004592
Anopheles gambiae
AGAP004592
I
0.938
SRSF6
Macaca mulatta
ENSMMUG00000006742
N
0.750
SRSF6
Monodelphis domestica
ENSMODG00000003107
I
0.750
SRSF6
Erinaceus europaeus
ENSEEUG00000002324
N
0.708