CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
GJ12847
(
Drosophila virilis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0200082
T44040_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0227264
RRM
103
144
HSLIAKAAKPRQKHARFCLVEFKSKEDRNQALEDIKKSIESD
FBpp0227264
RRM
200
264
VVITNLPKSSSVAQLRKLFENAVDIQIKPGRGKFRDFSAATVTLPTTMDARNAIKLDLSIGGTKL
Links
Other
RRM
family RBPs
Other
Drosophila virilis
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GL17875
Drosophila persimilis
FBgn0155478
N
0.796
GA14827-RA
Drosophila pseudoobscura
FBgn0074854
N
0.796
GI16595
Drosophila mojavensis
FBgn0139343
N
0.759
GK13495
Drosophila willistoni
FBgn0215503
N
0.700