CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GK21872
(
Drosophila willistoni
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0223857
T44234_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0251015
RRM
54
123
LIVRNISYKSTDETLRQHFQQWGTLEDVNILKRGDGKLVGCAFVQYETINQATKAIKEANGKEMLGRQVF
FBpp0251015
RRM
230
300
VFIKNVPFDAEDADLRKVCRKFGIVQYAIINRQQISGHSKGTAFVKFKNKESADLCLQAGTEFKLMEEVLD
FBpp0251015
RRM
379
456
LSIHNLPQSYDNEKLKQMALTYTGFRPHECRVMREQKITPEFPQGKSKGFGFLSFDTHQRALTALRKLNNNPQIFGTQ
Links
Other
RRM
family RBPs
Other
Drosophila willistoni
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GJ21111
Drosophila virilis
FBgn0208244
N
0.895
GM11803
Drosophila sechellia
FBgn0166745
N
0.890
GD24928
Drosophila simulans
FBgn0196242
N
0.890
GE11426
Drosophila yakuba
FBgn0229232
N
0.890
GH21568
Drosophila grimshawi
FBgn0129029
N
0.890
CG4806
Drosophila melanogaster
FBgn0260456
N
0.890
GI19540
Drosophila mojavensis
FBgn0142277
N
0.886
GG19902
Drosophila erecta
FBgn0112102
N
0.886
GF11912
Drosophila ananassae
FBgn0088951
N
0.877
GL11105
Drosophila persimilis
FBgn0148715
N
0.831
GA18446-RA
Drosophila pseudoobscura
FBgn0078448
N
0.831