CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
GE26284
(
Drosophila yakuba
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0243315
T44377_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0271294
RRM
6
68
VYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKELLGERVV
Links
Other
RRM
family RBPs
Other
Drosophila yakuba
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GM24118
Drosophila sechellia
FBgn0178982
N
1.000
GD18917
Drosophila simulans
FBgn0190428
N
1.000
GG19772
Drosophila erecta
FBgn0111973
N
1.000
B52
Drosophila melanogaster
FBgn0004587
D
1.000
AGAP004592
Anopheles gambiae
AGAP004592
I
1.000
SRSF6
Callithrix jacchus
ENSCJAG00000017888
I
0.730
SRSF6
Homo sapiens
ENSG00000124193
I
0.730