CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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NCU08942
(
Neurospora crassa
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
NCU08942
T45235_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU08942T0
RRM
474
523
TECGEKYGRVMRLFVETEGRRVFIRFTDGVSALRAVNALEGRIFNGNAIV
Links
Other
RRM
family RBPs
Other
Neurospora crassa
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
estExt_fgenesh1_pg.C_10164
Neurospora tetrasperma
estExt_fgenesh1_pg.C_10164
N
1.000
estExt_fgenesh2_pg.C_11051
Neurospora discreta
estExt_fgenesh2_pg.C_11051
N
0.960
FOXG_05320
Fusarium oxysporum
FOXG_05320
N
0.740
estExt_Genewise1.C_70446
Cryphonectria parasitica
estExt_Genewise1.C_70446
N
0.740
FVEG_02810
Fusarium verticillioides
FVEG_02810
N
0.720
GLRG_07477
Colletotrichum graminicola
GLRG_07477
N
0.706