POPTR_0323s00200 (Populus trichocarpa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 POPTR_0323s00200 T45714_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0323s00200.1 RRM 38 108

Links

Other RRM family RBPs
Other Populus trichocarpa RBPs

7 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A9PGV5_POPTR Populus trichocarpa POPTR_0001s32720 N 0.944
B9P731_POPTR Populus trichocarpa POPTR_0323s00210 N 0.845
A9P9S1_POPTR Populus trichocarpa POPTR_0017s08570 N 0.845
GSVIVG00021024001 Vitis vinifera GSVIVG00021024001 N 0.718
cassava7020.valid.m1 Manihot esculenta cassava7020.valid.m1 N 0.718
PK23911.1 Cannabis sativa PK23911.1 N 0.704
29629.m001443 Ricinus communis 29629.m001443 N 0.704