CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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usp102
(
Schizosaccharomyces pombe
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
SPBC4B4.07c
T46205_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPBC4B4.07c-1
RRM
28
99
LYIRNIEEKIRLTMLKRILEHLFGSYGKVIDVQARKTLRMRGQAFVVFDNLENASRALKDLQGYPLYGKPMM
SPBC4B4.07c-1
RRM
176
241
LLLQNIPQEVNADVLTQIFEAFSGFQEVRMVPGRRGIAFVEYDSDREATVAKNGTTGMSLSGNQIK
Links
Other
RRM
family RBPs
Other
Schizosaccharomyces pombe
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
SPOG_01227
Schizosaccharomyces cryophilus
SPOG_01227
N
0.841
SOCG_01821
Schizosaccharomyces octosporus
SOCG_01821
N
0.819