CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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cgd1_1070
(
Cryptosporidium parvum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
cgd1_1070
T46382_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
cgd1_1070
RRM
43
113
LFCGDLGNDVTEEILANAFKKYASFEKCKVIRNKHTGKSRGYGFVSFTNPNDMLNAMKEMNRKYVGSRPIT
Links
Other
RRM
family RBPs
Other
Cryptosporidium parvum
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Chro.10128
Cryptosporidium hominis
Chro.10128
N
0.986
CMU_035790
Cryptosporidium muris
CMU_035790
N
0.761
TGVEG_046310
Toxoplasma gondii
TGVEG_046310
N
0.704
TGME49_003080
Toxoplasma gondii
TGME49_003080
N
0.704
NCLIV_021850
Neospora caninum
NCLIV_021850
N
0.704
TGGT1_017860
Toxoplasma gondii
TGGT1_017860
N
0.704