CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LmjF25.1080
(
Leishmania major
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
LmjF25.1080
T47010_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
LmjF25.1080
RRM
96
158
FGNLRNGTTEEDFLSLFNRDAIATHRLINQDGKSFAFVEFVSAQALTVALSLDQTFQRGRRMY
Links
Other
RRM
family RBPs
Other
Leishmania major
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LinJ25_V3.1120
Leishmania infantum
LinJ25_V3.1120
N
1.000
LbrM25_V2.0970
Leishmania braziliensis
LbrM25_V2.0970
N
1.000
LmxM25.1080
Leishmania mexicana
LmxM25.1080
N
0.984