CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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NCLIV_053370
(
Neospora caninum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
NCLIV_053370
T47209_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCLIV_053370
RRM
119
145
LYVGNLPPSLEVPQLMEFLNAAMAAVG
NCLIV_053370
RRM
153
193
PAVKAWRSTDGHYAFVEFRTMEEASNGMQLNGLNCMGFNLR
NCLIV_053370
RRM
316
377
LCILDLPPLMSEEKVRQLVETFGPVNAFHLLKKDDGSEMVCIVEYVDLESQEQAMDILHSNS
NCLIV_053370
RRM
557
588
NEQKPATIGFAYVEFEDCEWSAKARKVSGHKD
Links
Other
RRM
family RBPs
Other
Neospora caninum
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TGVEG_093020
Toxoplasma gondii
TGVEG_093020
N
0.871
TGME49_108920
Toxoplasma gondii
TGME49_108920
N
0.871
TGGT1_055960
Toxoplasma gondii
TGGT1_055960
N
0.871