CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PBANKA_130940
(
Plasmodium berghei
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
PBANKA_130940
T47271_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PBANKA_130940
RRM
32
102
LCVKNIPKETTENELLELFKPFGSIENINLKVNKNVGPYAIYAHVYFSSPEEAKRCLKQMNGKILNGRALR
Links
Other
RRM
family RBPs
Other
Plasmodium berghei
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PCHAS_131260
Plasmodium chabaudi
PCHAS_131260
N
0.958
PY05556
Plasmodium yoelii
PY05556
N
0.901
PF14_0433
Plasmodium falciparum
PF14_0433
N
0.887
PVX_118205
Plasmodium vivax
PVX_118205
N
0.831