CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PFE0160c
(
Plasmodium falciparum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
PFE0160c
T47392_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PFE0160c
RRM
14
84
LLIRKLKFDTSPSIVREKFKRFGAIKDVYLPIDYYTKEPRGFGFVEFYDAKDAEQALKEMNGSEIDGSRIE
Links
Other
RRM
family RBPs
Other
Plasmodium falciparum
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PCHAS_110270
Plasmodium chabaudi
PCHAS_110270
N
0.915
PVX_097740
Plasmodium vivax
PVX_097740
N
0.915
PBANKA_110300
Plasmodium berghei
PBANKA_110300
N
0.901
PKH_102990
Plasmodium knowlesi
PKH_102990
N
0.901
PY04699
Plasmodium yoelii
PY04699
N
0.831