CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PVX_094315
(
Plasmodium vivax
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
PVX_094315
T47515_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PVX_094315
RRM
92
162
LYVSNLSSKITTSRLQDIFEEYGTIEKCYVISNPITRESRNFGFVTFNNPDDANNAMIKANKMDIEGRIIN
Links
Other
RRM
family RBPs
Other
Plasmodium vivax
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PBANKA_120080
Plasmodium berghei
PBANKA_120080
N
0.859
PF10_0028-b
Plasmodium falciparum
PF10_0028-b
N
0.845
PCHAS_120150
Plasmodium chabaudi
PCHAS_120150
N
0.845
PF10_0028-a
Plasmodium falciparum
PF10_0028-a
N
0.845