CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
TGGT1_123910
(
Toxoplasma gondii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
TGGT1_123910
T47907_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TGGT1_123910
RRM
141
210
VYVGNVDYSSTPAELQEHFKSCGTINRITIMVDKYTGHPKGYAYIEFNSEAAVQNAILLSDTVFKQRQIK
Links
Other
RRM
family RBPs
Other
Toxoplasma gondii
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TGME49_011020
Toxoplasma gondii
TGME49_011020
N
1.000
NCLIV_011840
Neospora caninum
NCLIV_011840
N
1.000
TGVEG_008880
Toxoplasma gondii
TGVEG_008880
N
1.000
TP03_0088
Theileria parva
TP03_0088
N
0.729
TA03875
Theileria annulata
TA03875
N
0.729
EDO05317.1
Babesia bovis
EDO05317.1
N
0.700
CAOG_03505
Capsaspora owczarzaki
CAOG_03505
N
0.700