CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TGVEG_084640
(
Toxoplasma gondii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
TGVEG_084640
T48047_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TGVEG_084640
RRM
120
189
VRVSNLDYSVLEEDLKELFAAVGEVVKVWIDYDRTDRSKGTGGCIFRSVFDAKRAIEVYEGRRLEGLPLR
Links
Other
RRM
family RBPs
Other
Toxoplasma gondii
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TGME49_091330
Toxoplasma gondii
TGME49_091330
N
1.000
TGGT1_031890
Toxoplasma gondii
TGGT1_031890
N
1.000
NCLIV_043070
Neospora caninum
NCLIV_043070
N
0.886