e_gwh2.1.218.1 (Phanerochaete chrysosporium)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gwh2.1.218.1 T50294_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gwh2.1.218.1 RRM 50 120
e_gwh2.1.218.1 RRM 138 207
e_gwh2.1.218.1 RRM 231 300
e_gwh2.1.218.1 RRM 334 403

Links

Other RRM family RBPs
Other Phanerochaete chrysosporium RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1Plus.C_1210056 Postia placenta estExt_Genewise1Plus.C_1210056 N 0.893
estExt_fgenesh3_kg.C_20205 Heterobasidion annosum estExt_fgenesh3_kg.C_20205 N 0.890
CC1G_04203 Coprinopsis cinerea CC1G_04203 N 0.890
estExt_genemark.C_11050 Pleurotus ostreatus estExt_genemark.C_11050 N 0.868
estExt_fgenesh2_kg.C_20318 Agaricus bisporus estExt_fgenesh2_kg.C_20318 N 0.868
estExt_Genewise1Plus.C_21802 Schizophyllum commune estExt_Genewise1Plus.C_21802 N 0.861
gww1.8.38.1 Laccaria bicolor gww1.8.38.1 N 0.851
estExt_fgenesh2_pg.C_60255 Schizophyllum commune estExt_fgenesh2_pg.C_60255 N 0.836
PGTG_10266 Puccinia graminis PGTG_10266 N 0.786
estExt_fgenesh1_pm.C_80030 Sporobolomyces roseus estExt_fgenesh1_pm.C_80030 N 0.786
e_gw1.49.8.1 Melampsora laricis populina e_gw1.49.8.1 N 0.779
UM03494 Ustilago maydis UM03494 N 0.772
RO3G_08705 Rhizopus oryzae RO3G_08705 N 0.760
EDP42905.1 Malassezia globosa EDP42905.1 N 0.751
RO3G_11747 Rhizopus oryzae RO3G_11747 N 0.749
CNBG_2621 Cryptococcus neoformans CNBG_2621 N 0.744
estExt_Genewise1.C_110099 Tremella mesenterica estExt_Genewise1.C_110099 N 0.744
AMAG_03037 Allomyces macrogynus AMAG_03037 N 0.741
estExt_fgeneshMC_kg.C_70074 Mucor circinelloides estExt_fgeneshMC_kg.C_70074 N 0.739
AMAG_10316 Allomyces macrogynus AMAG_10316 N 0.738
SJAG_01222 Schizosaccharomyces japonicus SJAG_01222 N 0.737
estExt_fgeneshMC_pm.C_20555 Mucor circinelloides estExt_fgeneshMC_pm.C_20555 N 0.723
SJAG_04427 Schizosaccharomyces japonicus SJAG_04427 N 0.715
estExt_fgeneshPB_pm.C_440010 Phycomyces blakesleeanus estExt_fgeneshPB_pm.C_440010 N 0.713
pab1 Schizosaccharomyces pombe SPAC57A7.04c N 0.708
RO3G_03072 Rhizopus oryzae RO3G_03072 N 0.706
SPPG_01610 Spizellomyces punctatus SPPG_01610 N 0.702
SPOG_04913 Schizosaccharomyces cryophilus SPOG_04913 N 0.701
DEHA0G13255g Debaryomyces hansenii DEHA0G13255g N 0.701