estExt_Genewise1.C_240149 (Phycomyces blakesleeanus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_Genewise1.C_240149 T51232_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_240149 RRM 1 58
estExt_Genewise1.C_240149 RRM 76 145
estExt_Genewise1.C_240149 RRM 169 238
estExt_Genewise1.C_240149 RRM 272 341

Links

Other RRM family RBPs
Other Phycomyces blakesleeanus RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RO3G_08705 Rhizopus oryzae RO3G_08705 N 0.805
estExt_fgeneshMC_kg.C_70074 Mucor circinelloides estExt_fgeneshMC_kg.C_70074 N 0.801
RO3G_11747 Rhizopus oryzae RO3G_11747 N 0.798
estExt_fgeneshMC_pm.C_20555 Mucor circinelloides estExt_fgeneshMC_pm.C_20555 N 0.745
estExt_fgeneshPB_pm.C_440010 Phycomyces blakesleeanus estExt_fgeneshPB_pm.C_440010 N 0.720
RO3G_03072 Rhizopus oryzae RO3G_03072 N 0.716
estExt_fgenesh3_kg.C_20205 Heterobasidion annosum estExt_fgenesh3_kg.C_20205 N 0.702
estExt_Genewise1Plus.C_1210056 Postia placenta estExt_Genewise1Plus.C_1210056 N 0.702