estExt_Genewise1Plus.C_12200 (Trichoderma atroviride)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_Genewise1Plus.C_12200 T51368_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_12200 RRM 104 182

Links

Other RRM family RBPs
Other Trichoderma atroviride RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GLRG_00061 Colletotrichum graminicola GLRG_00061 N 0.937
FVEG_05403 Fusarium verticillioides FVEG_05403 N 0.924
FOXG_02231 Fusarium oxysporum FOXG_02231 N 0.911
MGG_14761 Magnaporthe oryzae MGG_14761 N 0.899
CHGG_03225 Chaetomium globosum CHGG_03225 N 0.899
VDAG_05893 Verticillium dahliae VDAG_05893 N 0.887
VDBG_06830 Verticillium albo atrum VDBG_06830 N 0.887
genemark.4448_g Thielavia terrestris genemark.4448_g N 0.886
estExt_Genewise1.C_41387 Myceliophthora thermophila estExt_Genewise1.C_41387 N 0.873
estExt_fgenesh1_pm.C_30108 Neurospora tetrasperma estExt_fgenesh1_pm.C_30108 N 0.861
NCU07548 Neurospora crassa NCU07548 N 0.861
estExt_Genewise1Plus.C_50154 Neurospora discreta estExt_Genewise1Plus.C_50154 N 0.861
gw1.7.878.1 Trichoderma virens gw1.7.878.1 N 0.810
e_gw1.9.260.1 Trichoderma reesei e_gw1.9.260.1 N 0.810
estExt_Genewise1.C_11750 Cryphonectria parasitica estExt_Genewise1.C_11750 N 0.797
BDBG_08305 Blastomyces dermatitidis BDBG_08305 N 0.722
HCAG_02503 Histoplasma capsulatum HCAG_02503 N 0.709