estExt_Genewise1Plus.C_sca_14_chr10_3_00018 (Nectria haematococca)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_Genewise1Plus.C_sca_14_chr10_3_00018 T51534_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_sca_14_chr10_3_00018 RRM 76 146

Links

Other RRM family RBPs
Other Nectria haematococca RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
FVEG_07344 Fusarium verticillioides FVEG_07344 N 0.986
FOXG_04224 Fusarium oxysporum FOXG_04224 N 0.986
FGSG_01904 Fusarium graminearum FGSG_01904 N 0.972
fgenesh1_pg.C_scaffold_28000022 Trichoderma virens fgenesh1_pg.C_scaffold_28000022 N 0.930
estExt_Genewise1.C_180314 Trichoderma reesei estExt_Genewise1.C_180314 N 0.930
GLRG_01286 Colletotrichum graminicola GLRG_01286 N 0.915
gw1.13.356.1 Trichoderma atroviride gw1.13.356.1 N 0.915
MGG_07511 Magnaporthe oryzae MGG_07511 N 0.873
BDBG_04556 Blastomyces dermatitidis BDBG_04556 N 0.859
BC1G_05132 Botrytis cinerea BC1G_05132 N 0.859
VDAG_04577 Verticillium dahliae VDAG_04577 N 0.859
VDBG_09339 Verticillium albo atrum VDBG_09339 N 0.859
SS1G_07495 Sclerotinia sclerotiorum SS1G_07495 N 0.859
HCAG_04664 Histoplasma capsulatum HCAG_04664 N 0.845
ATEG_06451 Aspergillus terreus CADATEAG00007044 N 0.845
PABG_06275 Paracoccidioides brasiliensis PABG_06275 N 0.845
An07g02990 Aspergillus niger CADANGAG00005571 N 0.831
AO090005000269 Aspergillus oryzae CADAORAG00002284 N 0.831
fgenesh1_pm.00771_#_149 Aspergillus carbonarius fgenesh1_pm.00771_#_149 N 0.831
AFUA_7G05260 Aspergillus fumigatus CADAFUAG00009507 N 0.831
AFLA_075060 Aspergillus flavus CADAFLAG00000288 N 0.831
CPSG_07669 Coccidioides posadasii CPSG_07669 N 0.831
NFIA_026460 Neosartorya fischeri CADNFIAG00002567 N 0.831
estExt_Genewise1Plus.C_12199 Neurospora discreta estExt_Genewise1Plus.C_12199 N 0.831
CIMG_04697 Coccidioides immitis CIMG_04697 N 0.831
NCU04164 Neurospora crassa NCU04164 N 0.831
scaffold_1-snap.352.1 Neurospora tetrasperma scaffold_1-snap.352.1 N 0.831
AB06486.1 Alternaria brassicicola AB06486.1 N 0.817
ACLA_006960 Aspergillus clavatus CADACLAG00000697 N 0.817
estExt_fgenesh1_pg.C_10219 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_10219 N 0.817
ANIA_06676 Aspergillus nidulans CADANIAG00007461 N 0.817
estExt_fgenesh1_pg.C_40358 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_40358 N 0.817
estExt_Genewise1Plus.C_130074 Cryphonectria parasitica estExt_Genewise1Plus.C_130074 N 0.817
PMAA_052310 Penicillium marneffei PMAA_052310 N 0.817
PTRG_07268 Pyrenophora tritici repentis PTRG_07268 N 0.817
Pc12g05910 Penicillium chrysogenum Pc12g05910 N 0.817
EAT92286.2 Phaeosphaeria nodorum EAT92286.2 N 0.803
SNOG_00791 Stagonospora nodorum SNOG_00791 N 0.803
Pa_2_11080 Podospora anserina Pa_2_11080 N 0.803
estExt_fgenesh1_kg.C_30108 Myceliophthora thermophila estExt_fgenesh1_kg.C_30108 N 0.789
MCYG_05842 Microsporum canis MCYG_05842 N 0.775
estExt_Genewise1Plus.C_chr_40253 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_40253 N 0.775
MGYG_06129 Microsporum gypseum MGYG_06129 N 0.775
CHGG_07146 Chaetomium globosum CHGG_07146 N 0.761
TESG_06970 Trichophyton tonsurans TESG_06970 N 0.761
TERG_06272 Trichophyton rubrum TERG_06272 N 0.761
estExt_fgenesh2_pg.C_21066 Thielavia terrestris estExt_fgenesh2_pg.C_21066 N 0.761
TRV_06236 Trichophyton verrucosum TRV_06236 N 0.761
TEQG_06803 Trichophyton equinum TEQG_06803 N 0.761
GSTUMT00009853001 Tuber melanosporum GSTUMT00009853001 N 0.746