fgenesh1_pg.C_scaffold_9000049 (Trichoderma virens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_pg.C_scaffold_9000049 T51956_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_9000049 RRM 261 301
fgenesh1_pg.C_scaffold_9000049 RRM 347 407

Links

Other RRM family RBPs
Other Trichoderma virens RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pm.C_scaffold_4000242 Trichoderma reesei fgenesh1_pm.C_scaffold_4000242 N 0.951
estExt_fgenesh1_pg.C_11138 Trichoderma atroviride estExt_fgenesh1_pg.C_11138 N 0.941
FVEG_00856 Fusarium verticillioides FVEG_00856 N 0.833
FOXG_00654 Fusarium oxysporum FOXG_00654 N 0.833
BC1G_08007 Botrytis cinerea BC1G_08007 N 0.705