CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GID1.0049164
(
Dictyostelium purpureum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
GID1.0049164
T52570_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
GID1.0049164
RRM
122
194
LYVGDLASDVNEVVLNELFSKVGRNAIASIHVCRDSNTYRSLGYAYVNFYNNHDAERALDTLNYSMIHGKPCR
GID1.0049164
RRM
212
280
VFVKNLEKAVDNAMLYDVFSSFGNILSCKVEYEKGISKGYGYVHFETSESSGKAIERINGTLVLGKPIF
GID1.0049164
RRM
297
367
VFFRNADESVTQEMIQEELSKFGEIEICTLKIDSTGKSKGLGTVEFKNCEDAQKLLAVEADSIQINGKPIT
GID1.0049164
RRM
390
459
LFLSNIDESIEKETIKEEFSKHGAIIGCKIVQDESGKNKGYGFITFSEVSEANKALEALNGFTFGNKQIT
Links
Other
RRM
family RBPs
Other
Dictyostelium purpureum
RBPs
1 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
pabpc1B
Dictyostelium discoideum
DDB_G0290745
N
0.746