CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PredSwiss_CON2907.2
(
Pneumocystis carinii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
PredSwiss_CON2907.2
T54692_0.6
Pneumocystis Genome Project (2010-Oct-5)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PredSwiss_CON2907.2
RRM
82
152
LFAGDLGGEVSDETLFKAFQQYKSLSKAKVIRDKKTGKSKGYGFVAFKDPDEFVRAWREMNGKYIGSHPVK
Links
Other
RRM
family RBPs
Other
Pneumocystis carinii
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PredSwiss_ASS2010_1146.1
Pneumocystis carinii
PredSwiss_ASS2010_1146.1
N
1.000
GSTUMT00010522001
Tuber melanosporum
GSTUMT00010522001
I
0.704